<p>The percentage of the genes that appeared in the comparisons made with the samples from the patients with the same treatment in remission and relapse and from patients with no treatment at all is visualized and used as a measure for how truly a module reflects the underlying pathophysiology.</p
Number of genes significantly changed in each treatment when compared to either the untreated sample...
<p>Five groups of mutated genes were ranked in the top 50, 100, 150, 200 and 250 by betweenness coef...
<p>Each bar represents the distribution of the fraction of genes showing fold change difference in e...
<p><b>A</b>: direction of the alteration (over/underexpression) of the 174 differentially expressed ...
Percentage of synthetic terms and covered genes using each semantic similarity measure and compariso...
<p>The overlapping percentage is calculated as the ratio for the number of intersection and union of...
<p>Each bar indicates the percentage of the dysregulated genes in the expressed genes on each chromo...
<p>(A) The number of detected gene modules against MR for the coexpression-based method (left 6 bars...
<p>Number of genes differentially expressed in both conditions by specificity (female, male, common)...
<p>We compared the levels of expression of 15,861 genes with nonzero expression levels in both liver...
<p>Percent of target genes (from the regulatory network) that are differentially expressed by each o...
<p>‘consensus’ stands for the amount of genes shared with at least two other pipelines and ‘unique’ ...
<p>The relative proportions (%) of gene pairs (Non-Matching versus Matching) are shown with matching...
Correlation values (upper text) and P-values (lower, parenthetical text) are presented in each cell....
<p>(A) The extent of DC compared to random gene sets. For each discovered module and module pair we ...
Number of genes significantly changed in each treatment when compared to either the untreated sample...
<p>Five groups of mutated genes were ranked in the top 50, 100, 150, 200 and 250 by betweenness coef...
<p>Each bar represents the distribution of the fraction of genes showing fold change difference in e...
<p><b>A</b>: direction of the alteration (over/underexpression) of the 174 differentially expressed ...
Percentage of synthetic terms and covered genes using each semantic similarity measure and compariso...
<p>The overlapping percentage is calculated as the ratio for the number of intersection and union of...
<p>Each bar indicates the percentage of the dysregulated genes in the expressed genes on each chromo...
<p>(A) The number of detected gene modules against MR for the coexpression-based method (left 6 bars...
<p>Number of genes differentially expressed in both conditions by specificity (female, male, common)...
<p>We compared the levels of expression of 15,861 genes with nonzero expression levels in both liver...
<p>Percent of target genes (from the regulatory network) that are differentially expressed by each o...
<p>‘consensus’ stands for the amount of genes shared with at least two other pipelines and ‘unique’ ...
<p>The relative proportions (%) of gene pairs (Non-Matching versus Matching) are shown with matching...
Correlation values (upper text) and P-values (lower, parenthetical text) are presented in each cell....
<p>(A) The extent of DC compared to random gene sets. For each discovered module and module pair we ...
Number of genes significantly changed in each treatment when compared to either the untreated sample...
<p>Five groups of mutated genes were ranked in the top 50, 100, 150, 200 and 250 by betweenness coef...
<p>Each bar represents the distribution of the fraction of genes showing fold change difference in e...